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国家重点基础研究发展计划(2009CB118400)

作品数:50 被引量:395H指数:11
相关作者:韩天富吴存祥邱丽娟常汝镇关荣霞更多>>
相关机构:中国农业科学院作物科学研究所东北农业大学河北农业大学更多>>
发文基金:国家重点基础研究发展计划国家自然科学基金国家高技术研究发展计划更多>>
相关领域:农业科学生物学经济管理理学更多>>

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Cloning and Characterization of Putative Hd6 Ortholog Associated with Zea mays L. Photoperiod Sensitivity
2011年
The photoperiod response of lowering is critical to the survival and successful reproduction in crops. The Hd6 gene, encoding a protein similar to the Arabidopsis α-subunit of CASEIN KINASE2α (CK2α) has been reported to affect flowering time through the photoperiodic pathway in rice. In this study, the maize ortholog, ZmHd6, has been cloned and its role in the photoperiodic pathway was investigated. ZmHd6 encodes 332 amino acids with six distinct domains: two CK2 active domains, a nuclear localization signal sequence, a N terminal domain, an ATP binding site, and an active site of serine/threonine protein kinase. ZmHd6 was constitutively expressed in the leaves and shoot apical meristem (SAM) with the highest expression in SAMs of plants with seven leaves under long and short day conditions. Delayed flowering time under long day (LD) conditions were observed in ZmHd6 overexpression transgenic Arabidopsis plants compared to the wild type. In transgenic Arabidopsis plants, ZmHd6 was expressed in a circadian oscillatory pattern, TOC1 peak expression was delayed, new GI, CO, and FT expressions reached to peak after 3 h while entering illumination period and oscillatory expression patterns of CO and FT were created during the dark phase. These results suggested that ZmHd6 might negatively regulate flowering time under LD conditions by delaying TOC1 peak expression and disrupting CO and FT expression in transgenic Arabidopsis plants.
KU Li-xia LI Si-yuan CHEN Xiao WU Lian-cheng WANG Xin-tao CHEN Yan-hui
关键词:EXPRESSION
Genome-Wide Expression Profile of Maize Root Response to Phosphorus Deficiency Revealed by Deep Sequencing被引量:1
2014年
Phosphorus (P) is one of the three primary macronutrients that are required in large amounts for plant growth and development. To better understand molecular mechanism of maize and identify relevant genes in response to phosphorus deficiency, we used Solexa/Illumina's digital gene expression (DGE) technology to investigate six genome-wide expression profiles of seedling roots of the low-P tolerant maize inbred line 178. DGE studies were conducted at 6, 24 and 72 h under both phosphorus deficient and sufficient conditions. Approximately 3.93 million raw reads for each sample were sequenced and 6 816 genes exhibited significant levels of differential expressions in at least one of three time points in response to P starvation. The number of genes with increased expression increased over time from 6 to 24 h, whereas genes with decreased expression were more abundant at 72 h, suggesting a gradual response process for P deficiency at different stages. Gene annotations illustrated that most of differentially expressed genes (DEGs) are involved in different cellular and molecular processes such as environmental adaptation and carbohydrate metabolism. The expression of some known genes identified in other plants, such as those involved in root architecture, P metabolism and transport were found to be altered at least two folds, indicating that the mechanisms of molecular and morphological adaptation to P starvation are conserved in plants. This study provides insight into the general molecular mechanisms underlying plant adaptation to low-P stress and thus may facilitate molecular breeding for improving P utilization in maize.
SU Shun-zhongWU LingLIU DanLU Yan-liLIN Hai-jianZHANG Shu-zhiSHEN Ya-ouLIU Hai-lanZHANG Zhi-mingRONG Ting-zhaoZHANG XiaoTIAN Yue-huiNIE ZhiGAO Shi-bin
关键词:MAIZEROOT
人工诱发创制大豆皱叶、类病突变体及其发育特性研究
物理或化学诱变育种技术作为创造作物新变异的重要途径,可使诱变群体基因突变频率大幅度提高,较易获得所需要的变异,特别在保持原有亲本特性、改良单一性状上尤为优越,已在主要农作物遗传育种研发中得到广泛应用。本文根据黄化、花色、...
聂智星代金英李丛丛赵团结
关键词:大豆诱变叶解剖结构
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Mapping of QTL Associated with Drought Tolerance in a Semi-Automobile Rain Shelter in Maize (Zea mays L.)被引量:6
2011年
Drought is a major constraint in maize production worldwide. We studied quantitative trait loci (QTL) underlying drought tolerance for maize plants grown in two different environments. Traits investigated included ASI, plant height, grain yield, ear height, and ear setting. A genetic linkage map was constructed with 120 simple sequence repeat (SSR) markers based on an F2 population derived from a cross between D5 (resistant parent) and 7924 (susceptible parent). Correlation and heritability were calculated. QTLs of these traits were identified by composite interval mapping combined with a linkage map covering 1 790.3 cM. The markers were arranged in ten linkage groups. QTL mapping was made of the mean trait performance of the 180 F2:3 population. The results showed five, five, six, four, and five QTLs for ASI, plant height, grain yield, ear height, and ear setting under full irrigation condition, respectively, and four, seven, six, four, and four QTLs for ASI, plant height, grain yield, ear height, and ear setting under severe late stress conditions, respectively. Especially the four QTLs detected for five traits in 2008 and 2009. The universal QTLs information generated in this study will aid in undertaking an integrated breeding strategy for further genetic studies in drought tolerance improvement in maize.
ZHU Jing-jing WANG Xiao-peng SUN Cui-xia ZHU Xiu-miao LI Meng ZHANG Guo-dong TIAN Yan-chen WANG Ze-li
关键词:MAIZE
国家大豆区域试验品种(系)SSR位点纯合度分析被引量:16
2012年
利用30对SSR引物,检测2005—2009年参加国家区域试验的1068份大豆品种(系)的位点纯合度。每年区试品种(系)的平均纯合度为94.9%~97.6%,纯合度高于85%和90%的品种(系)所占比例分别为95.0%和91.4%,纯合度低于85%的品种(系)有42份(占3.93%),主要为北方春大豆和黄淮夏大豆。位点纯合度低于85%的参试品种(系)的产量分析结果表明,只有11份品种(系)比对照增产5%以上,20份比对照减产0.04%~13.08%;与纯合度为100%的品种(系)比较发现,位点纯合度较低的品种(系)在区试中产量也较低。建议国家区试品种(系)纯合度标准不低于90%,以保证审定品种的特征特性,为大豆新品种的持续推广利用提供科技支撑。
关荣霞方宏亮何艳琴常汝镇邱丽娟
关键词:大豆SSR位点
利用生物信息学方法进行基于表达序列标签的玉米单核苷酸多态性标记的开发被引量:7
2010年
针对简单重复序列(SSR)标记密度不足、单核苷酸多态性(SNP)标记开发一般只基于2种基因型的序列差异,用以检测其他基因型的材料时多态性不高,不能满足玉米基因精细定位需要的现状,本研究从公共数据库下载来自不同遗传背景的玉米表达序列标签(EST),结合运用各种生物信息学软件,开发基于EST序列的高多态性SNP标记。通过对2018530条EST序列的比对分析,拼接发掘出遍布全基因组的80363个SNP位点。在SNP位点两侧保守序列上设计PCR引物,开发出12388个SNP标记(www.sicau.edu.cn/web/yms/snp/snp.html),包含34721个SNP位点。其中,6008个标记只含单一SNP位点,12762个位点的多态性信息含量(PIC)大于0.4,具有高度多态性。
吴玲付凤玲李晚忱刘海岚
关键词:表达序列标签玉米
A Modified Method for the Development of SSR Molecular Markers Based on Redundant EST Data and Its Application in Soybean被引量:3
2012年
EST-derived SSR marker has been developed in many species,but few methods of high efficiency have been reported for the exploitation of EST-SSR markers.Thus,a high efficiency method for mining millions of redundant EST data is needed.A modified method for the EST-SSR development with high efficiency was established based on the redundant EST data of soybean in this study.The method achieved its function through classifying ESTs according to the same SSR motif and detected candidate loci with redundant sequences.In this study,a total of 80 polymorphic EST-SSR markers of soybean were developed,50 of them were exploited by this modified method which proved the higher speed and efficiency of this method.All the 80 polymorphic EST-SSRs were mapped on soybean physical map through in silico mapping and 15 markers were integrated on a genetic map constructed in previous study.A software named hpSSR(high polymorphic SSR) was programmed based on the concept of the up-built method for EST-SSR development.This method is not only pragmatic for EST-SSR exploitation in soybean,but also effective for the development of the marker in other species if the redundancy EST data is available.
ZHAO XueCHANG WeiHAN Ying-pengTENG Wei-liLI Wen-bin
关键词:EST-SSRSOYBEANPOLYMORPHISM
玉米组氨酸三聚体核苷结合蛋白基因Zm-HINT1的克隆及其原核表达载体构建被引量:1
2011年
通过RT-PCR方法和基因克隆技术对玉米黄早4HINT1基因进行了分子克隆和序列分析.结果表明,黄早4HINT1 cDNA全长为729 bp,氨基酸序列与动物HINT1有较高的相似度,并且包含HITN1蛋白家族保守的活性位点区域.同时,为进一步研究玉米HINT1基因的理化性质及生物功能,利用PET-28 a构建了黄早4HINT1的原核表达载体.
吴刘记吴连成祖小峰王平安陈彦惠
关键词:玉米分子克隆原核表达
基于掖478导入系的玉米产量性状QTL鉴定被引量:16
2011年
【目的】鉴定玉米产量相关性状基因位点及包含有利等位基因的导入系,为了解产量性状形成的遗传基础及针对玉米自交系产量性状的分子设计提供参考和依据。【方法】以QB80和Qi319为供体亲本,掖478为轮回亲本,采用回交结合定向选择,分别构建含有61和72个家系的基础导入系群体。通过2年4点田间试验,利用完备复合区间作图进行产量及其相关性状的QTL(quantitative trait locus,QTL)分析。【结果】4个环境下,在QB80为供体的导入系群体中,共检测到9个性状的49个QTL;在Qi319为供体的导入系群体中,检测到9个性状的42个QTL。在2个及以上环境中均检测到的QTL有16个。同一性状在不同环境下所检测的QTL定位在相同的染色体区域,不同性状的QTL也定位在相同或临近的染色体区域,形成多个QTL富集区。2个群体所检测的QTL位点具有较少的一致性,说明2个供体材料中含有不同的有利基因位点。同时,导入片段中含有利基因的导入系,其相关性状明显得以改良,这些导入系可用于QTL聚合以改良掖478的产量相关性状。【结论】QB80较Qi319与掖478间的遗传差异更大,能检测更多的产量性状QTL;2个导入系群体中含有优良等位基因的导入系可用于QTL聚合改良掖478;QTL富集区是为产量性状基因的克隆提供可供参考的重要染色体区域。
赵璞刘瑞响李成璞邢向茹曹晓良陶勇生张祖新
关键词:导入系
大豆苗期耐盐性的简便鉴定方法被引量:22
2013年
盐胁迫是影响大豆产量的重要非生物胁迫因素,筛选耐盐种质资源对培育耐盐大豆品种具有重要的意义。本研究利用4个耐盐品种和4个盐敏感品种进行苗期耐盐性鉴定,以蛭石为培养基质,在大豆真叶展开时,分别用100、200和250mmolL-1的NaCl溶液处理,每2d浇一次盐溶液,每天测定大豆真叶SPAD值。盐处理8d后,分别取各品种的根、茎、叶,用原子吸收光谱仪测定其Na+含量。结果表明,用200mmolL-1NaCl处理的耐盐品种和盐敏感品种表型差异明显,但叶片Na+含量差异不显著;用250mmolL-1NaCl处理后,表型差异明显且叶片Na+含量差异显著。200mmolL-1和250mmolL-1NaCl处理下叶片失绿明显,盐敏感品种叶片积累的Na+含量与SPAD值极显著负相关。本研究建立了一种以蛭石为基质,用200mmolL-1或250mmolL-1NaCl处理,8d即可进行大豆苗期耐盐性鉴定的简便方法,为大豆种质资源苗期耐盐性的大规模鉴定及耐盐品种选择和耐盐机制的研究提供了方法。
姜静涵关荣霞郭勇常汝镇邱丽娟
关键词:大豆苗期耐盐性
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