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国家自然科学基金(30771362)

作品数:6 被引量:34H指数:4
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发文基金:国家自然科学基金国家教育部博士点基金江苏省自然科学基金更多>>
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GmAGL15基因启动子的克隆及序列分析被引量:1
2008年
为探明大豆GmAGL15基因的表达调控规律,应用电子克隆技术从大豆基因组中克隆了GmAGL15 1000 bp的启动子序列,用PLACE在线启动子预测工具分析表明:该序列含有启动子的一般结构,如TATA-BOX、CAAT-BOX。另外还含有一些顺式作用元件,如调控GmAGL15的组织特异的和特定发育阶段的表达,对胁迫的应答,对光的响应,以及反馈调节,推测大豆GmAGL15基因表达有相应组织特异性,可能受蔗糖、生长素和乙烯等的调控。用FootPrinter和PLACE在线工具对大豆与拟南芥等其他4种植物的同源基因启动子的顺式元件进行比较,发现不同植物的启动子既有保守性,又有多样性,转录因子结合位点的分布相似,但也有区别,暗示了GmAGL15基因表达调控的精确性或多样性。
郭伟汪潇淋王慧喻德跃
关键词:大豆启动子电子克隆
大豆醛脱氢酶基因GmALDH3-1的克隆及在生殖器官中的表达被引量:4
2010年
为了研究大豆生殖器官发育的分子机制,前期工作中我们利用基因芯片技术进行了大豆花发育相关基因的鉴定,其中一个花优势表达基因在大豆花中的表达量为叶片中的85倍。通过生物信息学方法,拼接了该基因的全长序列,并通过RT-PCR克隆了该基因。BLAST检索分析表明该基因编码醛脱氢酶,命名为GmALDH3-1。GmALDH3-1包含一个1485bp的开放阅读框,编码494个氨基酸残基。GmADLH3-1与白杨醛脱氢酶PtALDH3相似性最高(氨基酸相似率83%,一致率为68%),而与来自于人的HsALDH3B的氨基酸一致率和相似率分别为39%和59%。系统发生分析表明,GmALDH3-1与其他植物ALDH3亚家族成员位于一个分支,且与白杨PtALDH3和拟南芥AtALDH3F1亲缘关系最近。采用实时定量RT-PCR检测了GmALDH3-1基因在大豆叶、根和花中的表达,表明GmALDH3-1基因在花中高丰度表达,在根和叶中未检测到表达。运用基因芯片信息分析了GmALDH3-1在种子发育过程中的表达情况,表明GmALDH3-1在种子发育过程中的外表皮、内表皮、外胚珠和种脐中表达量较高。
黄方迟英俊何慧喻德跃
关键词:大豆醛脱氢酶生殖器官基因表达
大豆GmTINY1基因的克隆与表达分析被引量:3
2009年
采用基因芯片技术,从大豆中鉴定了一个荚优势表达基因。利用生物信息学的方法,拼接了该基因的全长序列,并通过RT-PCR克隆了该基因。Blast检索分析表明,该基因编码一个具有AP2结构域的转录因子,且与拟南芥DREB类蛋白TINY的氨基酸相似度最高,将该基因命名为GmTINY1。GmTINY1包含一个735bp的开放阅读框,编码244个氨基酸残基。GmTINY1与拟南芥TINY和TINY2蛋白的相似度分别为59%与62%。系统发生分析表明,GmTINY1、TINY和TINY2位于一个分支,且同属于DREB亚家族。实时定量RT-PCR检测表明,GmTINY1基因在荚中高丰度表达,在花中的表达量也较高,在根中的表达量较低,而在叶片中未检测到表达。基因芯片信息分析结果表明,GmTINY1在种子发育的子叶期的种脐部分高丰度表达。由此推论,GmTINY1基因在大豆生殖器官发育中可能发挥调控作用,可能与种子发育过程中种脐的形成有关。
黄方何慧迟英俊盖钧镒喻德跃
关键词:大豆转录因子TINYDREB
大豆种子发育过程中差异表达蛋白的蛋白质组分析(英文)被引量:6
2008年
采用蛋白质组学技术研究了大豆N2899种子发育过程中蛋白质的差异表达。运用PDQuest软件比较分析不同发育时期(15,20,30,40,50DAF和成熟种子)大豆种子蛋白的双向电泳图谱,在考染的2-D胶上共检测到337个蛋白点。有些蛋白质在整个发育过程中都出现,而另外一些只出现在发育早期或成熟的种子中。利用基质辅助-激光解吸/电离-飞行时间-质谱(MALDI-TOF-MS)技术,分析了不同发育时期30个差异表达蛋白,并用Pro-found(http://www.prowl.rockefeller.edu)工具,对质谱产生的肽质量指纹(PMF)数据进行NCBInr数据库检索,结果鉴定了18个蛋白质。比较发现,这些蛋白主要参与种子的成熟(如伴豆球蛋白)、逆境胁迫反应(如抗坏血酸过氧化酶)、细胞分裂(如Skp1)和蛋白运输(如钙网蛋白)等。研究表明,种子发育过程十分复杂,所鉴定的蛋白质,可为从分子水平上研究大豆种子发育进程中蛋白的积累和调控奠定基础。
郑蕊徐晓燕李春梅盖钧镒喻德跃
关键词:大豆种子MALDI-TOF-MS蛋白质组
Detection of Quantitative Trait Loci for Yield and Drought Tolerance Traits in Soybean Using a Recombinant Inbred Line Population被引量:8
2009年
To investigate the genetic basis of drought tolerance in soybean (Glycine max L. Merr.) a recombinant inbred population with 184 F2:7:11 lines developed from a cross between Kefengl (drought tolerant) and Nannong1138-2 (drought sensitive) were tested under water-stressed and well-watered conditions in field and greenhouse trials. Traits measured included leaf wilting coefficient, excised leaf water loss and relative water content as indicators of plant water status and seed yield. A total of 40 quantitative trait loci (QTLs) were identified: 17 for leaf water status traits under drought stress and 23 for seed yield under well-watered and drought-stressed conditions in both field and greenhouse trials. Two seed yield QTLs were detected under both well-watered and drought-stressed conditions in the field on molecular linkage group H and Dlb, while two seed yield QTLs on molecular linkage group C2 were found under greenhouse conditions. Several QTLs for traits associated with plant water status were identified in both field and greenhouse trials, including two leaf wilting coefficient QTLs on molecular linkage group A2 and one excised leaf water loss QTL on molecular linkage group H. Phenotypic correlations of traits suggested several QTLs had pleiotropic or location-linked associations. These results will help to elucidate the genetic basis of drought tolerance in soybean, and could be incorporated into a marker-assisted selection breeding program to develop high-yielding soybean cultivars with improved tolerance to drought stress.
Weijun DuDeyue YuSanxiong Fu
GmAGL15基因启动子的克隆及序列分析
<正>为探明大豆GmAGL15基因的表达调控规律,应用电子克隆技术从大豆基因组中克隆了GmAGL15 1000bp的启动子序列,用PLACE在线启动子预测工具分析表明:该序列含有启
郭伟汪潇淋王慧喻德跃
关键词:大豆启动子电子克隆
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Identification of genomic regions determining flower and pod numbers development in soybean (Glycine max L.)被引量:12
2010年
Flower and pod numbers per plant are important agronomic traits underlying soybean yield. So far quantitative trait loci (QTL) de- tected for flower and pod-related traits have mainly focused on the final stage, and might therefore have ignored genetic effects expressed during a specific developmental stage. Here, dynamic expressions of QTL for flower and pod numbers were identified using 152 recom- binant inbred lines (RILs) and a linkage map of 306 markers. Wide genetic variation was found among RILs; 17 unconditional and 18 conditional QTL were detected for the two traits at different developmental stages over two years. Some QTL were detected only at one stage and others across two or more stages, indicating that soybean flower and pod numbers development may be governed by time-dependent gene expression. Three main QTL (qfn-Chrl8-2, qfn-Chr20-1, and qfn-Chr19) were detected for flower number, and two main QTL (qpn-Chrll and qpn-Chr20) were detected for pod number. The phenotypic variation explained by them ranged from 6.1% to 34.7%. The markers linked to these QTL could be used in marker-assisted selection for increasing soybean flower and pod numbers, with the ultimate aim of increasing soybean yield. Comparison of the QTL regions for flower and pod numbers traits with the related genes reported previously showed that seven and four related genes were located in the QTL regions of qfn-Chr11 and qfn-Chr19, respectively. These results provide a basis for free mapping and cloning of flower and pod development-related genes.
Dan Zhang, Hao Cheng, Hui Wang, Hengyou Zhang, Chunying Liu, Deyue Yu National Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
关键词:SOYBEAN
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